Publications by Bayfield Lab Members:
Mansouri-Noori, F. and Bayfield, M.A. Electrophoretic mobility shift assays (EMSAs) for in vitro detection of protein-nucleic acid interactions. STAR Protocols (2024) 5(2):103128 (Pubmed)
Porat, J., Vakiloroayaei, A., Remnant, B.M., Talebi, M., Cargill, T., Bayfield, M.A. Crosstalk between the tRNA methyltransferase Trm1 and RNA chaperone La influences eukaryotic tRNA maturation. J. Biol. Chem. (2023) 299(11):105326. (Pubmed)
Mansouri-Noori. F., Pircher, A., Bilodeau, D., Siniavskaia, L. Grigull, J., Rissland, O.S., Bayfield, M.A. The LARP1 homolog Slr1p controls the stability and expression of proto-5'TOP mRNAs in fission yeast. Cell Reports (2023) 42(10):113226. (Pubmed)
Miller, D., Kerkhofs, K., Abbas-Aghababazadeh, F., Madahar, S.S., Minden, M.D., Hébert, J., Haibe-Kains, B., Bayfield, M.A., Benchimol, S. Heterogeneity in leukemia cells that escape drug-induced senescence-like state. Cell Death & Disease (2023) 14(8):503. (Pubmed)
Porat, J., Slat, J.A., Rader, S.D., Bayfield, M.A. The fission yeast methyl phosphate capping enzyme Bmc1 guides 2'-O-methylation of the U6 snRNA. Nucleic Acids Research (2023) 51(16):8805-8819. (Pubmed)
Kerkhofs K., Garg J., Fafard-Couture É., Abou Elela S., Scott M.S., Pearlman R.E., Bayfield M.A. Altered tRNA processing is linked to a distinct and unusual La protein in Tetrahymena thermophila. Nature Communications (2022) Nov 28;13(1):7332. (Pubmed)
Porat J., El Baidouri M., Grigull J., Deragon J.M., Bayfield M.A. The methyl phosphate capping enzyme Bmc1/Bin3 is a stable component of the fission yeast telomerase holoenzyme. Nature Communications. (2022) Mar 11;13(1):1277. (Pubmed)
Porat J., Kothe U., Bayfield M.A. Revisiting tRNA chaperones: New players in an ancient game. RNA. (2021) Feb 16;27(5):543-559. doi: 10.1261/rna.078428.120 (Pubmed)
Bayfield, M.A., Vinayak, J., Kerkhofs, K. and Mansouri-Noori, F. La proteins couple use of sequence-specific and non-specific binding modes to engage RNA substrates. (2021) RNA Biol. Feb;18(2):168-177 (Pubmed)
Beenstock J., Ona S.M., Porat J., Orlicky S., Wan L.C.K., Ceccarelli D.F., Maisonneuve P., Szilard R.K., Yin Z., Setiaputra D., Mao D.Y.L., Khan M., Raval S., Schriemer D.C., Bayfield M.A., Durocher D., Sicheri F. A substrate binding model for the KEOPS tRNA modifying complex. Nature Communications (2020) Dec 4;11(1):6233. doi: 10.1038/s41467-020-19990-5 (Pubmed)
Porat J. and Bayfield M.A. Use of tRNA-Mediated Suppression to Assess RNA Chaperone Function. (2020) Methods Mol Biol. 2106:107-120 (Pubmed)
Bayfield M.A., Kerkhofs K. and Mansouri-Noori F. C-lection by the DM15 Motif Gets LARP1 to the TOP. Structure. (2019) Dec 3;27(12):1737-1739 (Pubmed)
Marrella S.A., Brown K.A., Mansouri-Noori F., Porat J., Wilson D.J., Bayfield M.A. An interdomain bridge influences RNA binding of the human La protein. (2019) J Biol Chem. 294(5):1529-1540 (Pubmed)
Ehyai S., Miyake T., Williams D., Vinayak J., Bayfield M.A., McDermott J.C. FMRP recruitment of β-catenin to the translation pre-initiation complex represses translation. (2018) EMBO Rep. pii: e45536. doi: 10.15252/embr.201745536 (Pubmed)
Vinayak, J., Marrella S.A., Hussain R.H., Rozenfeld L., Solomon K., Bayfield M.A. Human La binds mRNAs through contacts to the poly(A) tail. (2018) Nucleic Acids Research. 46(8):4228-4240 (Pubmed)
Vakiloroayaei, A., Shah, N.S., Oeffinger, M., Bayfield, M.A. The RNA chaperone La promotes pre-tRNA maturation via indiscriminate binding of both native and misfolded targets. (2017) Nucleic Acids Research. 45(19):11341-11355 (Pubmed)
Brown, K.A., Sharifi, S.,, Hussain, R., Donaldson, L., Bayfield, M.A., Wilson D.J. Distinct dynamic modes enable the engagement of dissimilar ligands in a promiscuous atypical RNA Recognition Motif. (2016) Biochemistry. 55(51):7141-7150 (Pubmed)
Tata A, Perez C, Campos ML, Bayfield MA, Eberlin MN, Ifa DR. Imprint desorption electrospray ionization mass spectrometry imaging for monitoring secondary metabolites production during antagonistic interaction of fungi. (2015) Anal Chem. 87(24):12298-305 (Pubmed)
Tata A, Perez CJ, Hamid TS, Bayfield MA, Ifa DR. Analysis of metabolic changes in plant pathosystems by imprint imaging DESI-MS. (2015) J Am Soc Mass Spectrom. 26(4):641-8. (Pubmed)
Hussain, R.H., Zawawi, M., Bayfield, M.A. Conservation of RNA chaperone activity of the human La related proteins 4, 6 and 7. (2013) Nucleic Acids Research. 41(18):8715-25 (PubMed)
Naeeni A.R., Conte M.R., Bayfield M.A. RNA chaperone activity of the human La protein is mediated by a variant RNA recognition motif. (2012) J Biol Chem. 287(8):5472-82 PubMed.
Iben, J., Epstein, J., Bayfield, M.A., Bruinsma. M. W., Hasson, S., Bacikova, D., Ahmad, D., Rockwell D., Kittler, E. Zapp M., and Maraia, R. J. Comparative whole genome sequencing reveals phenotypic tRNA gene duplication in spontaneous S. pombe La mutants. (2011) Nucleic Acid Research. 39(11):4728-42 PubMed.
Bayfield, M.A., Yang, R. and Maraia, R.M. Conserved and divergent features of the structure and function of La and La-related proteins (LARPs). (2010) Biochim Biophys Acta. 1799: 365–378. [PubMed]