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Centre for Research in Mass Spectrometry
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Amino Acid Codes and Structures
Amino Acid
3 Letter Code
1 Letter Code
HOOC(NH
2
)CH-R
Note
Alanine
Ala
A
-CH
3
-
Arginine
Arg
R
-CH
2
CH
2
CH
2
NHC(=NH)NH
2
Basic
Asparagine
Asn
N
-CH
2
CONH
2
-
Aspartic Acid
Asp
D
-CH
2
COOH
Acidic
Cysteine
Cys
C
-CH
2
SH
-
Glutamine
Gln
Q
-CH
2
CH
2
CONH
2
-
Glutamic Acid
Glu
E
-CH
2
CH
2
COOH
Acidic
Glycine
Gly
G
-H
-
Histidine
His
H
-CH
2
-Imidazole
Basic
Isoleucine
Ile
I
-CH(CH
3
)CH
2
CH
3
-
Leucine
Leu
L
-CH
2
CH(CH
3
)
2
-
Lysine
Lys
K
-CH
2
CH
2
CH
2
CH
2
NH
2
Basic
Methionine
Met
M
-CH
2
CH
2
SCH
3
-
Phenylalanine
Phe
F
-CH
2
Ph
Aromatic
Proline
Pro
P
-NHCH
2
CH
2
CH
2
-
-
Serine
Ser
S
-CH
2
OH
-
Threonine
Thr
T
-CH(OH)CH
3
-
Tryptophan
Trp
W
-CH
2
-Indole
Aromatic
Tyrosine
Tyr
Y
-CH
2
(C
6
H
4
)OH
Aromatic
Valine
Val
V
-CH(CH
3
)
2
-
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Ion Chemistry Laboratory, York University
4700 Keele Street, Toronto, Ontario M3J 1P3